Content-Type: multipart/alternative; boundary="----=_NextPart_16842561.720480048614" X-Msg2Mime: True X-Msg2Mime-Client-Submit-Time: Fri, 20 Jun 2014 11:40:24 -0400 X-Msg2Mime-Message-Delivery-Time: Fri, 20 Jun 2014 11:40:37 -0400 X-Msg2Mime-Creation-Time: Tue, 17 May 2016 14:34:46 -0400 Received: from DM2PR02MB287.namprd02.prod.outlook.com (10.141.55.148) by DM2PR02MB286.namprd02.prod.outlook.com (10.141.55.146) with Microsoft SMTP Server (TLS) id 15.0.959.24 via Mailbox Transport; Fri, 20 Jun 2014 15:40:37 +0000 Received: from DM2PR02MB512.namprd02.prod.outlook.com (10.141.86.28) by DM2PR02MB287.namprd02.prod.outlook.com (10.141.55.148) with Microsoft SMTP Server (TLS) id 15.0.959.24; Fri, 20 Jun 2014 15:40:35 +0000 Received: from DM2PR02CA008.namprd02.prod.outlook.com (10.141.52.146) by DM2PR02MB512.namprd02.prod.outlook.com (10.141.86.28) with Microsoft SMTP Server (TLS) id 15.0.969.15; Fri, 20 Jun 2014 15:40:34 +0000 Received: from BN1BFFO11FD036.protection.gbl (2a01:111:f400:7c10::1:184) by DM2PR02CA008.outlook.office365.com (2a01:111:e400:2414::18) with Microsoft SMTP Server (TLS) id 15.0.959.24 via Frontend Transport; Fri, 20 Jun 2014 15:40:34 +0000 Received: from yang.toulouse.inra.fr (147.99.107.115) by BN1BFFO11FD036.mail.protection.outlook.com (10.58.144.99) with Microsoft SMTP Server (TLS) id 15.0.969.12 via Frontend Transport; Fri, 20 Jun 2014 15:40:34 +0000 Received: from [147.99.102.137] (lipmBpvNL [147.99.102.137]) (authenticated bits=0) by yang.toulouse.inra.fr (/8.14.4) with ESMTP id s5KFeOBW009139 (version=TLSv1/SSLv3 cipher=DHE-RSA-AES128-SHA bits=128 verify=NOT); Fri, 20 Jun 2014 17:40:25 +0200 (CEST) Message-ID: <53A455E8.8080806@toulouse.inra.fr> Date: Fri, 20 Jun 2014 17:40:24 +0200 From: Nicolas Langlade Reply-To: MIME-Version: 1.0 To: "Rieseberg, Loren" , "John M. Burke" , Lisa Donovan , "Hulke, Brent" CC: emily marden Subject: Re: Fwd: Genome Canada Large-scale applied research project competition: Genomics and Feeding the Future References: <439727E51BE77C4D872D5A3C8A6FA9CEE0CF5C52@JUPITER.ms.genomebc.ca> <200DE1D5-E263-4018-B0F4-E9E5FC27E967@mail.ubc.ca> In-Reply-To: <200DE1D5-E263-4018-B0F4-E9E5FC27E967@mail.ubc.ca> X-Miltered: at yang with ID 53A455E8.000 by Joe's j-chkmail (http : // j-chkmail dot ensmp dot fr)! X-j-chkmail-Enveloppe: 53A455E8.000/147.99.102.137/lipmBpvNL/[147.99.102.137]/ X-j-chkmail-Score: MSGID : 53A455E8.000 on yang.toulouse.inra.fr : j-chkmail score : . : R=. U=. O=. B=0.010 -> S=0.010 X-j-chkmail-Status: Ham X-Virus-Scanned: clamav-milter 0.97 at yang X-Virus-Status: Clean Return-Path: nicolas.langlade@toulouse.inra.fr X-EOPAttributedMessage: 0 X-MS-Exchange-Organization-MessageDirectionality: Incoming X-Forefront-Antispam-Report: CIP:147.99.107.115;CTRY:FR;IPV:NLI;EFV:NLI;SFV:NSPM;SFS:(428001)(34854003)(199002)(42154003)(164054003)(52044002)(71364002)(2473001)(479174003)(377454003)(51704005)(189002)(53754006)(92726001)(87836001)(54356999)(50986999)(15974865002)(102836001)(4396001)(87266999)(84326002)(83506001)(15975445006)(2171001)(53806999)(101416001)(15202345003)(74662001)(99396002)(21056001)(561944003)(79102001)(74502001)(512874002)(76176999)(16236675004)(71186001)(74482001)(43066003)(33656002)(65816999)(46102001)(64126003)(65806001)(65956001)(6806004)(81342001)(44976005)(80022001)(80316001)(19580405001)(19580395003)(83322001)(64706001)(77096002)(77982001)(83072002)(104016002)(86362001)(95666004)(85852003)(81542001)(105586002)(20776003)(76482001)(85306003)(559001)(579004);DIR:INB;SFP:;SCL:1;SRVR:DM2PR02MB512;H:yang.toulouse.inra.fr;FPR:;MLV:sfv;PTR:mx.toulouse.inra.fr;A:1;MX:1;LANG:en; X-MS-Exchange-Organization-Network-Message-Id: 880c901c-dbf6-470e-41fb-08d15ab51c62 X-Microsoft-Antispam: BCL:0;PCL:0;RULEID: X-MS-Exchange-Organization-AVStamp-Service: 1.0 Received-SPF: None (: toulouse.inra.fr does not designate permitted sender hosts) Authentication-Results: spf=none (sender IP is 147.99.107.115) smtp.mailfrom=nicolas.langlade@toulouse.inra.fr; X-MS-Exchange-Organization-SCL: 1 X-Microsoft-Antispam: BCL:0;PCL:0;RULEID: X-MS-Exchange-Organization-AuthSource: BN1BFFO11FD036.protection.gbl X-MS-Exchange-Organization-AuthAs: Anonymous ------=_NextPart_16842561.720480048614 Content-Type: text/plain; charset="utf-8" Content-Transfer-Encoding: quoted-printable Hi Loren, Thank you for your invitation. I accept without any hesitation. We should be able to perform some help with the population and also some phenotyping in field conditions and on the platform Heliaphen we could do some phenotyping and collect samples for molecular analysis. Kind regards, Nicolas Le 19/06/14 19:53, Rieseberg, Loren a =C3=A9crit : Hi all, Genome Canada has finally announced their food genomics competition. As we discussed earlier, I was planning to submit an expanded version of our recent NSF proposal (led by John and Lisa) on the Evolutionary Genomics of Abiotic Stress Resistance in Sunflower. I was considering the following expansions: (1) add Helianthus debilis to the population genomic analyses; (2) consider doing WGS sequencing for the population genomic analyses rather than the 200K SNP array; (3) expand the transcriptomic analysis to include the four wild species; (4) include development of both the male and female MAGIC populations; and (5) conduct field-based phenotyping / performance of the two MAGIC populations at several sites around the work, potentially including Africa. In Canada, we are required to include a social science research component in our proposals. For our previous project, we worked with Emily Marden in the Faculty of Law here at UBC. She has been great to work with and has become increasingly interested in how the international treaty on plant genetic resources is affecting the use of germplasm in the world=E2=80=99s genebanks by industry. The MAGIC populati= on offers an interesting case study since some of the germplasm comes from the Canadian gene bank and thus is covered by the treaty. Much of the rest is from the USDA collections and has no restrictions in its use. We are considering using the Canadian germplasm in just one of the two populations, so we have a treatment and control so to speak. Would the five of you would be willing to serve as co-PIs on this proposal (we will have additional collaborators of course, including the other co-PIs from the NSF proposal, as well as half a dozen industry groups)? If so, please let me know if you agree with the proposed expansions and/or or have other suggestions or comments. Also, Genome Canada requires co-funding and typically does not allow money to leave Canada (although we have been able to get exceptions here and there in the past). My plan was to use the NSF grant as co-funding, along with the in kind support from industry for phenotyping. However, it would be very helpful if INRA and the USDA would be willing to formally offer in kind support (e.g., personnel and supply costs associated with developing the MAGIC population as well as phenotyping). Thanks, loren Begin forwarded message: From: Alison Dendoff > Subject: Genome Canada Large-scale applied research project competition: Genomics and Feeding the Future Date: June 17, 2014 at 10:51:22 PM PDT To: "lriesebe@mail.ubc.ca " > Hi Loren, Genome Canada officially launched the Request for Applications for the 2014 Large-Scale Applied Research Project Competition: Genomics and Feeding the Future yesterday in partnership with the Western Grains Research Foundation (WGRF). The amount of funding available from Genome Canada is now up to 40% of the overall approved project budget, and GBC will contribute up to an additional 25%. The RFA and registration documents are attached and other documents can be found on Genome BC=E2=80=99s website at the following link: http://www.genomebc.ca/research-programs/opportunities/current-funding-c ompetitions/genomics-and-feeding-future/ Please feel free to contact me if you are interested in learning more about this competition. Best regards, Alison adendoff@genomebc.ca 604-637-4381 Alison Dendoff Coordinator, New Programs Genome British Columbia From: Alison Dendoff Sent: Wednesday, March 12, 2014 4:42 PM To: 'lriesebe@mail.ubc.ca ' Cc: David Charest; Gabe Kalmar Subject: Upcoming Genome Canada funding opportunity Dear Loren, Genome Canada will soon be seeking proposals for large-scale applied research projects, which focus on the application of genomics and related technologies (bioinformatics, epigenomics, metabolomics, metagenomics, nutrigenomics, pharmacogenomics, proteomics and transcriptomics) in the agri-food and fisheries/aquaculture sectors to address opportunities and challenges related to Canadian and global food safety, food security and sustainable production. Applicants must demonstrate how their proposal holds a high potential for attaining concrete deliverables by the end of the funding period and therefore translate into significant social and/or economic benefits to BC and Canada in as short a time-frame as possible after the close of the project. Proposals that address challenges that are relevant both in the Canadian context and also to Canada's international development priorities by providing sustainable, genomic-based solutions to problems of agriculture and fisheries/aquaculture in developing countries will also be considered. Project total budgets can range in size from $2M to $10M, and successful projects will be awarded funding for a term of up to four (4) years. At this time the amount of funding from Genome Canada is undetermined, but will minimally be one-third of the overall approved budget, with GBC funding an additional 25% of the overall approved budget. Genome Canada is continuing to work with the Centres and other funding agencies to increase its maximum contribution to 50% of the overall budget. Additionally, eligible sources of co-funding may include specific Canadian federal funding sources (e.g. Agriculture and Agri-Food Canada, Department of Fisheries and Oceans, Growing Forward 2). Notable co-funding exceptions include Canadian Institutes of Health Research (CIHR), the Natural Sciences and Engineering Research Council (NSERC), the Social Sciences and Humanities Research Council (SSHRC), and tri-agency programs (e.g., the Networks of Centres of Excellence, Centers of Excellence for Commercialization and Research, and the Canada Research Chairs). Foreign sources are also acceptable. Potential research applicants should contact Genome BC directly to discuss possible co-funding scenarios. Based on Genome Canada's criteria lead research applicants must be from eligible institutions: 1. Canadian post-secondary organizations and their affiliated institutions including hospitals and research institutes; 2. Canadian non-federal government departments or agencies and not-for-profit organizations (including community or charitable organizations) with an explicit research or knowledge-translation mandate. Research teams may include as co-applicants international, private sector (for-profit organizations), or federal laboratory scientists who may also provide co-funding for eligible expenses. Genome Canada funds can be awarded to researchers at Canadian post-secondary organizations including hospitals and research institutes, Canadian non-federal government departments and agencies (e.g. BC Provincial Plant and Animal Health Branch, British Columbia Centre for Disease Control) and not-for-profit organizations. Genome Canada cannot flow funds outside of Canada for research undertaken in a foreign country, in for-profit organizations or in federal laboratories (e.g. Agriculture and Agri-Food Canada, Canadian Food Inspection Agency, Department of Fisheries and Oceans etc.) except for costs incurred based on a reasonable fee-for-service arrangement or contract. Genome BC funds can be awarded to researchers at British Columbia post-secondary organizations including hospitals and research institutes, Canadian federal government departments and agencies (e.g. Agriculture and Agri-Food Canada, Canadian Food Inspection Agency, Department of Fisheries and Oceans etc.) and not-for-profit organizations. Genome BC cannot flow funds outside of British Columbia for research undertaken outside the province, into for-profit organizations or in to provincial laboratories (e.g. BC Provincial Plant and Animal Health Branch) except for costs incurred based on a reasonable fee-for-service arrangement or contract. End-users must be clearly integrated into the project team in the form of a project team member, collaborator, and/or member of the management team. Co-funding would clearly demonstrate end-user interest in the project=E2=80=99s potential deliverables, although it is no= t a requirement for an end-user organization to contribute to the co-funding required. Social Scientists and humanists can submit Large-scale GE3LS (Genomics, Ethical, Environmental, Economic, Legal and Social) research projects for funding. All research projects must include an integrated GE3Ls research component as part of the research team. All research applicants from BC who are leading a proposal and research team are required to apply for Genome Canada funding through Genome BC. All interested researchers and their teams must contact Genome BC in advance of submitting any project proposal to discuss the objectives and deliverables of the research program. BC researchers who are co-applicants on projects led by other Genome Centres in Canada are encouraged to contact Genome BC to determined whether their project is eligible for research funding for the BC portion of the project. If you are interested in learning more about this program, or receiving the RFA when it is released, please contact David Charest, Director, Sector Development, and Sector Manager for the agri-foods and agriculture sector at dcharest@genomebc.ca . David will be away from the office until April 7; in his absence, please feel free to contact Gabe Kalmar, VP, Sector Development at gkalmar@genomebc.ca . Best regards, Alison Dendoff on behalf of David Charest Alison Dendoff CPIM, B.Sc. Coordinator, New Programs Genome British Columbia t. 604-637-4381 I c. 604-808-0472 I f. 604-738-8597 adendoff@genomebc.ca / www.genomebc.ca http://www.genomebc.ca/opportunities/current-funding-competitions/ "A catalyst for a vibrant genomics-driven life sciences cluster on Canada's West Coast" This message contains confidential information and is intended only for the individual named. If you are not the named addressee you should not disseminate, distribute or copy this email. Please notify the sender immediately by email if you have received this email by mistake and delete this email from your system. Loren Rieseberg Botany Department University of British Columbia 3529-6270 University Blvd Vancouver, B.C. V6T 1Z4 Phone: 604-827-4540 Fax: 604-822-6089 -- =3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D= =3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D= =3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D Nicolas Langlade Laboratoire Interactions Plantes Microorganismes INRA-CNRS 24 Chemin de Borde Rouge - Auzeville CS 52627 31326 Castanet Tolosan FRANCE Tel : +33 (0)5 61 28 54 58 Fax : +33 (0)5 61 28 50 61 Lab website : http://www2.toulouse.inra.fr/centre/lipm/ Sunrise project website: http://www.sunrise-project.fr/ Sunflower genomics webportal : http://www.heliagene.org/ =3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D= =3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D= =3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D ------=_NextPart_16842561.720480048614 Content-Type: text/rtf; charset="utf-8" Content-Transfer-Encoding: quoted-printable {\rtf1\ansi\ansicpg1252\fromhtml1 \fbidis \deff0{\fonttbl=0A=0D{\f0\fswiss\= fcharset0 Arial;}=0A=0D{\f1\fmodern Courier New;}=0A=0D{\f2\fnil\fcharset2 = Symbol;}=0A=0D{\f3\fmodern\fcharset0 Courier New;}=0A=0D{\f4\fswiss Helveti= ca;}=0A=0D{\f5\fswiss Lucida Handwriting;}}=0A=0D{\colortbl\red0\green0\blu= e0;\red0\green0\blue255;}=0A=0D\uc1\pard\plain\deftab360 \f0\fs24 =0A=0D{\*= \htmltag19 }=0A=0D{\*\htmltag34 }=0A=0D{\*\htmltag1 \par }=0A= =0D{\*\htmltag1 \par }=0A=0D{\*\htmltag241 }=0A=0D{\*\htmltag41 }= =0A=0D{\*\htmltag2 \par }=0A=0D{\*\htmltag242 }=0A=0D{\*\htmltag50 }\htmlrtf \viewkind5=0A=0D{\*\backgrou= nd {\shp{\*\shpinst{\sp{\sn fillColor}{\sv 16777215}}{\sp{\sn fFilled}{\sv = 1}}}}}\htmlrtf0 =0A=0D{\*\htmltag0 \par }=0A=0D{\*\htmltag240 }{\*\html= tag64}\htmlrtf {\htmlrtf0 Hi Loren,=0A=0D{\*\htmltag116
}\htmlrtf \line= =0A=0D\htmlrtf0 =0A=0D{\*\htmltag4 \par }=0A=0D{\*\htmltag84 }Thank you= for your invitation. I accept without any hesitation. We=0A=0D{\*\htmltag4= \par }\htmlrtf \htmlrtf0 =0A=0D{\*\htmltag84 }should be able to perfo= rm some help with the population and also=0A=0D{\*\htmltag4 \par }\htmlrtf = \htmlrtf0 =0A=0D{\*\htmltag84 }some phenotyping in field conditions an= d on the platform Heliaphen=0A=0D{\*\htmltag4 \par }\htmlrtf \htmlrtf0 =0A= =0D{\*\htmltag84 }we could do some phenotyping and collect samples for = molecular=0A=0D{\*\htmltag4 \par }\htmlrtf \htmlrtf0 =0A=0D{\*\htmltag84 = }analysis.=0A=0D{\*\htmltag116
}\htmlrtf \line=0A=0D\htmlrtf0 =0A=0D= {\*\htmltag4 \par }=0A=0D{\*\htmltag84 }Kind regards,=0A=0D{\*\htmltag1= 16
}\htmlrtf \line=0A=0D\htmlrtf0 =0A=0D{\*\htmltag4 \par }=0A=0D{\*\ht= mltag84 }Nicolas=0A=0D{\*\htmltag116
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}\htmlrtf {\htmlrtf= 0 {\*\htmltag64}\htmlrtf {\htmlrtf0 \li360 Genome Canada has finally announ= ced their food genomics=0A=0D{\*\htmltag4 \par }\htmlrtf \htmlrtf0 =0A=0D{= \*\htmltag84 }competition. =0A=0D{\*\htmltag84  }\htmlrtf \'= a0\htmlrtf0 As we discussed earlier, I was planning to=0A=0D{\*\htmltag4 \p= ar }\htmlrtf \htmlrtf0 =0A=0D{\*\htmltag84 }submit an expanded v= ersion of our recent NSF proposal (led by=0A=0D{\*\htmltag4 \par }\htmlrtf = \htmlrtf0 =0A=0D{\*\htmltag84 }John and Lisa) on the Evolutionar= y Genomics of Abiotic Stress=0A=0D{\*\htmltag4 \par }\htmlrtf \htmlrtf0 = =0A=0D{\*\htmltag84 }Resistance in Sunflower. I was considering t= he following=0A=0D{\*\htmltag4 \par }\htmlrtf \htmlrtf0 =0A=0D{\*\htmltag8= 4 }expansions: =0A=0D{\*\htmltag84  }\htmlrtf \'a0\htmlrtf0 = (1) add Helianthus debilis to the population=0A=0D{\*\htmltag4 \par }\htmlr= tf \htmlrtf0 =0A=0D{\*\htmltag84 }genomic analyses; (2) consider= doing WGS sequencing for the=0A=0D{\*\htmltag4 \par }\htmlrtf \htmlrtf0 = =0A=0D{\*\htmltag84 }population genomic analyses rather than the = 200K SNP array;=0A=0D{\*\htmltag4 \par }\htmlrtf \htmlrtf0 =0A=0D{\*\htmlt= ag84 }(3) expand the transcriptomic analysis to include the four= =0A=0D{\*\htmltag4 \par }\htmlrtf \htmlrtf0 =0A=0D{\*\htmltag84 = }wild species; (4) include development of both the male and=0A=0D{\*\htmlta= g4 \par }\htmlrtf \htmlrtf0 =0A=0D{\*\htmltag84 }female MAGIC po= pulations; and (5) conduct field-based=0A=0D{\*\htmltag4 \par }\htmlrtf \h= tmlrtf0 =0A=0D{\*\htmltag84 }phenotyping / performance of the two= MAGIC populations at=0A=0D{\*\htmltag4 \par }\htmlrtf \htmlrtf0 =0A=0D{\*= \htmltag84 }several sites around the work, potentially including = Africa.{\*\htmltag72}\htmlrtf\par}\htmlrtf0=0A =0D{\*\htmltag104
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}\htmlrtf {\htmlrtf0 =0A=0D{\*\htmltag0 \par }=0A=0D{= \*\htmltag240 }{\*\htmltag64}\htmlrtf {\htmlrtf0 \li7= 20 BC researchers who are co-applicants on projects=0A=0D{\*\htmltag4 \par = }\htmlrtf \htmlrtf0 =0A=0D{\*\htmltag84 }led by othe= r Genome Centres in Canada are=0A=0D{\*\htmltag4 \par }\htmlrtf \htmlrtf0 = =0A=0D{\*\htmltag84 }encouraged to contact Genome BC = to determined=0A=0D{\*\htmltag4 \par }\htmlrtf \htmlrtf0 =0A=0D{\*\htmltag= 84 }whether their project is eligible for research=0A= =0D{\*\htmltag4 \par }\htmlrtf \htmlrtf0 =0A=0D{\*\htmltag84 = }funding for the BC portion of the project. =0A=0D{\*\htmltag84 &n= bsp;}\htmlrtf \'a0\htmlrtf0 =0A=0D{\*\htmltag84  }\htmlrtf \'a0\htmlrt= f0 {\*\htmltag72}\htmlrtf\par}\htmlrtf0=0A =0D{\*\htmltag104
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}\htmlrtf {\htmlrtf0 =0A=0D{\*\htmltag0 \par }=0A=0D{= \*\htmltag240 }{\*\htmltag64}\htmlrtf {\htmlrtf0 \li7= 20 =0A=0D{\*\htmltag148 }\htmlrtf {\htmlrtf0 =0A=0D{\*\htm= ltag84  }\htmlrtf \'a0\htmlrtf0 =0A=0D{\*\htmltag116
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=0D\line=0A=0D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=
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}\htmlrtf }\htmlrtf0 =0A=0D{\*\htmltag0 \par }=0A= =0D{\*\htmltag240 }=0A=0D{\*\htmltag58 }=0A=0D{\*\htmltag2 \par }= =0A=0D{\*\htmltag27 }=0A=0D{\*\htmltag3 \par }} ------=_NextPart_16842561.720480048614 Content-Type: text/html; charset="utf-8" Content-Transfer-Encoding: quoted-printable Hi Loren,
Thank you for your invitation. I accept without any hesitation. We should be able to perform some help with the population and also some phenotyping in field conditions and on the platform Heliaphen we could do some phenotyping and collect samples for molecular analysis.
Kind regards,
Nicolas



Le 19/06/14 19:53, Rieseberg, Loren a =C3=A9crit :
Hi all,

Genome Canada has finally announced their food genomics competition.  As we discussed earlier, I was planning to submit an expanded version of our recent NSF proposal (led by John and Lisa) on the Evolutionary Genomics of Abiotic Stress Resistance in Sunflower. I was considering the following expansions:  (1) add Helianthus debilis to the population genomic analyses; (2) consider doing WGS sequencing for the population genomic analyses rather than the 200K SNP array; (3) expand the transcriptomic analysis to include the four wild species; (4) include development of both the male and female MAGIC populations; and (5) conduct field-based phenotyping / performance of the two MAGIC populations at several sites around the work, potentially including Africa.

In Canada, we are required to include a social science research component in our proposals.  For our previous project, we worked with Emily Marden in the Faculty of Law here at UBC.  She has been great to work with and has become increasingly interested in how the international treaty on plant genetic resources is affecting the use of germplasm in the world=E2=80=99s genebanks by industry.  The MAGIC popula= tion offers an interesting case study since some of the germplasm comes from the Canadian gene bank and thus is covered by the treaty.  Much of the rest is from the USDA collections and h= as no restrictions in its use.  We are considering using the Canadian germplasm in just one of the two populations, so we have a treatment and control so to speak.

Would the five of you would be willing to serve as co-PIs on this proposal (we will have additional collaborators of course, including the other co-PIs from the NSF proposal, as well as half a dozen industry groups)?  If so, please let me know if you agree with the proposed expansions and/or or have other suggestions or comments.  Also, Genome Canada requires co-funding and typically does not allow money to leave Canada (although we have been able to get exceptions here and there in the past).  My plan was to use the NSF grant as co-fundin= g, along with the in kind support from industry for phenotyping.  However, it would be very helpful if INRA and the USDA would be willing to formally offer in kind support (e.g., personnel and supply costs associated with developing the MAGIC population as well as phenotyping).

Thanks, loren


Begin forwarded message:

From: Alison Dendoff <adendoff@genomebc.ca&= gt;
Subject: Genome Canada Large-scale applied research project competition: Genomics and Feeding the Future
Date: June 17, 2014 at 10:51:22 PM PDT
To: <= span style=3D"font-family:'Helvetica'">"lriesebe@mail.ubc.ca" <lriesebe@mail.ubc.ca>

Hi Loren,=
 
Genome Canada officially launched the Request for Applications for the 2014 Large-Scale Applied Research Project Competition: Genomics and Feeding t= he Future&nb= sp;yesterday in partnership with the Western Grains Research Foundation (WGRF). The amount of funding available from Genome Canada is now up to 40% of the overall approved project budget, and GBC will contribute up to an additional 25%.
 
The RFA and registration documents are attached and other documents can be found on Genome BC=E2=80=99s websi= te at the following link:
 
Please feel free to contact me if you are interested in learning more about this competition.<= span style=3D"color:rgb(31,73,125)">
 
Best regards,
Alison
604-637-4381
 
Alison Dendoff
Coordinator, New Programs  
= Genome British Columbia
 
From: Alison Dendoff=  
Sent: Wednesday, March 12, 2014 4:42 PM
To: 'lriesebe@mail.ubc.= ca'
Cc: David Charest; Gabe Kalmar
Subject: Upcoming Genome Canada funding opportunity
 
Dear Loren,
 
Genome Canada will soon be seeking proposals for large-scale applied research projects, which focus on the application of genomics and related technologies (bioinformatics, epigenomics, metabolomics, metagenomics, nutrigenomics, pharmacogenomics, proteomics and transcriptomics) in the agri-food and fisheries/aquaculture sectors to address opportunities and challenges related to Canadian and global food safety, food security and sustainable production.  
 
Applicants must demonstrate how their proposal holds a high potential for attaining concrete deliverables by the end of the funding period and therefore translate into significant social and/or economic benefits to BC and Canada in as short a time-frame as possible after the close of the project.  Proposals  that address challenge= s that are relevant both in the Canadian context and also to Canada's international development priorities by providing sustain= able, genomic-based solutions to problems of agriculture and fisheries/aquaculture in developing countries will also be considered.
 
Project total budgets can range in size from $2M to $10M, and suc= cessful projects will be awarded funding for a term of up to four (4) years.  
 
At this time the amount of funding from Genome Canada is undetermined, but will minimally be one-third of the overall approved budget, with GBC funding an additional 25% of the overall approved budget.  Genome Canada is continuing to work with the Centres and other funding agencies to increase its maximum contribution to 50% of the overall budget.  
 
Additionally, elig= ible sources of co-funding may include specific Canadian federal funding sources (e.g. Agriculture and Agri-Food Canada, Department of Fisheries and Oceans, Growing Forward 2).  = Notable co-funding exceptions include Canadian Institutes of Health Research (CIHR), the Natural Sciences and Engineering Research Council (NSERC), the Social Sciences and Humanities Research Council (SSHRC), and tri-agency programs (e.g., the Networks of Centres of Excellence, Centers of Excellence for Commercialization and Research, and the Canada Research Chairs).  Foreign sources are also acceptable.  Potential resear= ch applicants should contact Genome BC directly to discuss possible co-funding scenarios.    = ;
 
Based on Genome Canada's criteria lead research applicants must be from eligible institutions:
1.   =    Canadian post-secondary organizations and their affiliated institutions including hospitals and research institutes;
2.   =    Canadian non-federal government departments or agencies and not-for-profit organizations (including community or charitable organizations) with an explicit research or knowledge-translation mandate.
Research teams may include as co-applicants international, private sector (for-profit organizations), or federal laboratory scientists who may also provide co-funding for eligible expenses. 
 
Genome Canada funds can be awarded to researchers at Canadian post-secondary organizations including hospitals and research institutes, Canadian non-federal government departments and agencies (e.g. BC Provincial Plant and Animal Health Branch, British Columbia Centre for Disease Control) and not-for-profit organizations.  Genome Canada cannot flow funds outside of Canada for research undertaken in a foreign country, in for-profit organizations or in federal laboratories (e.g. Agriculture and Agri-Food Canada, Canadian Food Inspection Agency, Department of Fisheries and Oceans etc.= ) except for costs incurred based on a reasonable fee-for-service arrangement or contract. 
 
Genome BC funds can be awarded to researchers at British Columbia post-secondary organizations including hospitals and research institutes, Canadian federal government departments and agencies (e.g. Agriculture and Agri-Food Canada, Canadian Food Inspection Agency, Department of Fisheries and Oceans&nbs= p;etc.) and not-for-profit organizations.  Genome BC cannot flow funds outside of British Columbia for research undertaken outside the province, into for-profit organizations or in to prov= incial laboratories (e.g. BC Provincial Plant and Animal Health Branch) except for costs incurred based on a reasonable fee-for-service arrangement or contract. 
 
End-users must be clearly integrated into the project team in the form of a project team member, collaborator, and/or member of the management team.  Co-funding would clearly demonstrate end-user interest in the project=E2=80=99s potential deliverables, although it is not a requirement for an end-user organization to contribute to the co-funding required.  
 
Social Scientists and humanists can submit Large-scale GE3LS (Genomics, Ethical, Environmental, Economic, Legal and Social) research projects for funding.  All resear= ch projects must include an integrated GE3Ls research component as part of the research team.   
 
All research applicants from BC who are leading a proposal and research team are required to apply for Genome Canada funding through Genome BC.  All interested researchers and their teams must contact Genome BC in advance of submitting any project proposal to discuss the objectives and deliverables of the research program.  
 
BC researchers who are co-applicants on projects led by other Genome Centres in Canada are encouraged to contact Genome BC to determined whether their project is eligible for research funding for the BC portion of the project.  &nbs= p;
 
If you are interested in learning more about this program, or receiving the RFA when it is released, please contact David Charest, Director, Sector Development, and Sector Manager for the agri-foods and agriculture sector at dcharest@genomebc.ca. David will be away from the office until April 7; in his absence, please feel free to contact Gabe Kalmar, VP, Sector Development at gka= lmar@genomebc.ca.
 
Best regards,
 
Alison Dendoff
on behalf of David Charest
 
Alison Dendoff CPIM, B.Sc.=
Coordinator, New Programs   Genome British Columbia
t. 604-637-4381  I  c. 604-808-0472  I&= nbsp; f. 604-738-8597=
 =
"A catalyst for a vibra= nt genomics-driven life sciences cluster on Canada's West Coast"
This message contains confidential information and is intended only for the individual named. If you are not the named addressee you should not disseminate, distribute or copy this email. Please notify the sender immediately by email if you have received this email by mistake and delete this email from your system.
 

Loren Rieseberg
Botany Department
University of British Columbia
3529-6270 University Blvd
Vancouver, B.C. V6T 1Z4
Phone: 604-827-4540
Fax: 604-822-6089 


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Nicolas Langlade

Laboratoire Interactions Plantes Microorganismes

INRA-CNRS
24 Chemin de Borde Rouge - Auzeville
CS 52627
31326 Castanet Tolosan FRANCE

Tel : +33 (0)5 61 28 54 58
Fax : +33 (0)5 61 28 50 61
Lab website : http://www2.toulouse.inra.fr/centre/lipm/
Sunrise project website: http://www.sunrise-project.fr/
Sunflower genomics webportal : http://www.heliagene.org/

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